424 unique samples | Dorsolateral prefrontal cortex (DLFPC) | ROSMAP cohort

Cell types

Excitatory Neurons

Rsquared

createDT(result_ext$matrix_rsquared)

Adjusted pvalue

createDT(result_ext$adj_matrix_pvalue_to_plot)

Inhibitory Neurons

Rsquared

createDT(result_inh$matrix_rsquared)

Adjusted pvalue

createDT(result_inh$adj_matrix_pvalue_to_plot)

Microglia

Rsquared

createDT(result_mic$matrix_rsquared)

Adjusted pvalue

createDT(result_mic$adj_matrix_pvalue_to_plot)

Oligodendrocytes

Rsquared

createDT(result_oli$matrix_rsquared)

Adjusted pvalue

createDT(result_oli$adj_matrix_pvalue_to_plot)

Astrocytes

Rsquared

createDT(result_ast$matrix_rsquared)

Adjusted pvalue

createDT(result_ast$adj_matrix_pvalue_to_plot)

Oligodendrocyte progenitor cells

Rsquared

createDT(result_opc$matrix_rsquared)

Adjusted pvalue

createDT(result_opc$adj_matrix_pvalue_to_plot)

Endothelial cells

There is no significant results to this cell type

Nominal pvalue

createDT(result_end$adj_matrix_pvalue_to_plot)

Session info

sessionInfo()
## R version 4.3.2 (2023-10-31 ucrt)
## Platform: x86_64-w64-mingw32/x64 (64-bit)
## Running under: Windows 11 x64 (build 26100)
## 
## Matrix products: default
## 
## 
## locale:
## [1] LC_COLLATE=Portuguese_Brazil.utf8  LC_CTYPE=Portuguese_Brazil.utf8   
## [3] LC_MONETARY=Portuguese_Brazil.utf8 LC_NUMERIC=C                      
## [5] LC_TIME=Portuguese_Brazil.utf8    
## 
## time zone: America/Sao_Paulo
## tzcode source: internal
## 
## attached base packages:
## [1] grid      stats     graphics  grDevices utils     datasets  methods  
## [8] base     
## 
## other attached packages:
##  [1] performance_0.12.2    lmerTest_3.1-3        lme4_1.1-35.5        
##  [4] Matrix_1.6-5          RColorBrewer_1.1-3    circlize_0.4.16      
##  [7] ComplexHeatmap_2.18.0 ggsignif_0.6.4        ggeasy_0.1.4         
## [10] ggpubr_0.6.0          lubridate_1.9.3       forcats_1.0.0        
## [13] stringr_1.5.1         purrr_1.0.2           tidyr_1.3.1          
## [16] tibble_3.2.1          tidyverse_2.0.0       ggplot2_3.5.0        
## [19] readr_2.1.5           rstatix_0.7.2         dplyr_1.1.4          
## 
## loaded via a namespace (and not attached):
##  [1] tidyselect_1.2.1    fastmap_1.2.0       digest_0.6.36      
##  [4] timechange_0.3.0    lifecycle_1.0.4     cluster_2.1.4      
##  [7] magrittr_2.0.3      compiler_4.3.2      rlang_1.1.3        
## [10] sass_0.4.9          tools_4.3.2         utf8_1.2.4         
## [13] yaml_2.3.10         knitr_1.48          htmlwidgets_1.6.4  
## [16] plyr_1.8.9          abind_1.4-5         numDeriv_2016.8-1.1
## [19] withr_3.0.1         BiocGenerics_0.48.1 stats4_4.3.2       
## [22] fansi_1.0.6         colorspace_2.1-0    scales_1.3.0       
## [25] iterators_1.0.14    MASS_7.3-60         insight_0.20.3     
## [28] cli_3.6.2           rmarkdown_2.27      crayon_1.5.3       
## [31] generics_0.1.3      rstudioapi_0.16.0   reshape2_1.4.4     
## [34] tzdb_0.4.0          rjson_0.2.21        minqa_1.2.7        
## [37] cachem_1.1.0        splines_4.3.2       parallel_4.3.2     
## [40] matrixStats_1.3.0   vctrs_0.6.5         boot_1.3-28.1      
## [43] jsonlite_1.8.8      carData_3.0-5       car_3.1-2          
## [46] IRanges_2.36.0      hms_1.1.3           GetoptLong_1.0.5   
## [49] S4Vectors_0.40.2    clue_0.3-65         crosstalk_1.2.1    
## [52] magick_2.8.4        foreach_1.5.2       jquerylib_0.1.4    
## [55] glue_1.7.0          nloptr_2.1.1        codetools_0.2-19   
## [58] DT_0.33             stringi_1.8.3       gtable_0.3.5       
## [61] shape_1.4.6.1       munsell_0.5.1       pillar_1.9.0       
## [64] htmltools_0.5.8.1   R6_2.5.1            doParallel_1.0.17  
## [67] evaluate_0.24.0     lattice_0.21-9      highr_0.11         
## [70] png_0.1-8           backports_1.4.1     broom_1.0.6        
## [73] bslib_0.8.0         Rcpp_1.0.12         nlme_3.1-163       
## [76] xfun_0.46           pkgconfig_2.0.3     GlobalOptions_0.1.2